Introduction | Installation | Why pyramidal images? | Usage | EBImage | magick images | OME.TIFF (Bio-Formats) images | Use cases | Visualizing H&E images | Interactive Shiny Applications | Session info
This package is considered a duplicate. The official version of this package is found at:https://bioc.r-universe.dev/ImageArray
Package: ImageArray 0.99.6
ImageArray: ImageArray: a framework for on-disk and in-memory image arrays
ImageArray provides a framework for on-disk and in-memory image arrays, specifically for pyramidal images stored in either HDF5 files or Zarr stores.
Authors:
ImageArray_0.99.6.tar.gz
ImageArray_0.99.6.zip(r-4.7)ImageArray_0.99.6.zip(r-4.6)ImageArray_0.99.6.zip(r-4.5)
ImageArray_0.99.6.tgz(r-4.6-any)ImageArray_0.99.6.tgz(r-4.5-any)
ImageArray_0.99.6.tar.gz(r-4.7-any)ImageArray_0.99.6.tar.gz(r-4.6-any)
ImageArray_0.99.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
ImageArray/json (API)
| # Install 'ImageArray' in R: |
| install.packages('ImageArray', repos = c('https://artur-man.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/bimsbbioinfo/imagearray/issues
On BioConductor:ImageArray-1.1.2(bioc 3.24)ImageArray-1.0.0(bioc 3.23)
Last updated from:2f90694fa3. Checks:7 ERROR, 2 OK. Indexed: no.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel-x86_64 | ERROR | 355 | ||
| source / vignettes | OK | 302 | ||
| linux-release-x86_64 | ERROR | 412 | ||
| macos-release-arm64 | ERROR | 242 | ||
| macos-oldrel-arm64 | ERROR | 233 | ||
| windows-devel | ERROR | 310 | ||
| windows-release | ERROR | 295 | ||
| windows-oldrel | ERROR | 352 | ||
| wasm-release | OK | 179 |
Exports:apermas.rasteraxesBFArraycreateImageArraycropflipflopgetImageInfoImageArraymodulatenegateopen_zarrpathpath<-realizerotatetypewriteImageArrayzarrcreateGroup
Dependencies:abindaskpassbase64encBiocGenericsbiocmakebitopsbslibcachemclicurlDelayedArraydigestdir.expiryEBImageevaluatefastmapfftwtoolsfilelockfontawesomefsgenericsgluegrumpyh5mreadHDF5Arrayhighrhtmltoolshtmlwidgetshttr2IRangesjpegjquerylibjsonliteknitrlatticelifecyclelocfitmagickmagrittrMatrixMatrixGenericsmatrixStatsmemoisemimeopensslpaws.commonpaws.storagepngR.methodsS3R.ooR.utilsR6rappdirsRarrRcppRCurlrhdf5rhdf5filtersRhdf5librlangrmarkdownS4ArraysS4VectorssassSparseArraysystifftinytexvctrswithrxfunxml2XVectoryaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| as.raster method for ImageArray object | as.raster,ImageArray-method |
| BFArray constructor method | BFArray BFArray-methods dim,BFArraySeed-method type,BFArraySeed-method |
| createImageArray | createImageArray |
| getImageInfo | getImageInfo |
| Methods for ImageArray | aperm,ImageArray-method axes axes,ImageArray-method crop crop,ImageArray-method dim,ImageArray-method flip flip,ImageArray-method flop flop,ImageArray-method ImageArray ImageArray-methods length,ImageArray-method modulate modulate,ImageArray-method negate negate,ImageArray-method rotate rotate,ImageArray-method type,ImageArray-method [,ImageArray,numeric,numeric,ANY-method [[,ImageArray,numeric-method [[<-,ImageArray,numeric-method |
| path of ImageArray image | path,ImageArray-method |
| path of ImageArray image | path<-,ImageArray-method |
| as.array | realize,ImageArray-method |
| writeImageArray | writeImageArray |
| zarrcreateGroup | open_zarr zarr-utils zarrcreateGroup |
