{ "_id": "69ce34dd4d9d4072a08fa5ce", "Package": "ZarrDataFrame", "Version": "0.0.0", "Date": "2024-03-11", "Title": "Bioconductor-friendly Bindings for Zarr", "Description": "Implements bindings for zarr store that are compatible\nwith Bioconductor S4 data structures, namely the DataFrame and\nDelayedArray. This allows Zarr-backed data to be easily used as\ndata frames with arbitrary sets of columns", "Authors@R": "c(\nperson(\"Artur\", \"Manukyan\", role=c(\"aut\", \"cre\"), email=\"artur-man@hotmail.com\")\n)", "License": "MIT + file LICENSE", "biocViews": "DataRepresentation, Infrastructure, Software", "VignetteBuilder": "knitr", "RoxygenNote": "7.3.2", "Encoding": "UTF-8", "Config/testthat/edition": "3", "Config/pak/sysreqs": "libblosc-dev libxml2-dev libzstd-dev libssl-dev\nzlib1g-dev", "Repository": "https://artur-man.r-universe.dev", "Date/Publication": "2025-04-14 21:27:57 UTC", "RemoteUrl": "https://github.com/Artur-man/ZarrDataFrame", "RemoteRef": "HEAD", "RemoteSha": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "NeedsCompilation": "no", "Packaged": { "Date": "2026-04-02 09:17:12 UTC", "User": "root" }, "Author": "Artur Manukyan [aut, cre]", "Maintainer": "Artur Manukyan ", "MD5sum": "e3368dee9af6b5fa4f59d9ec678854d3", "_user": "artur-man", "_type": "src", "_file": "ZarrDataFrame_0.0.0.tar.gz", "_fileid": "dbfb8c56bd11f835c74491724f63deee4063c2bf2af1c372f0ef646e89736092", "_filesize": 89083, "_sha256": "dbfb8c56bd11f835c74491724f63deee4063c2bf2af1c372f0ef646e89736092", "_created": "2026-04-02T09:17:12.000Z", "_distro": "noble", "_jobs": [ { "job": 69671923015, "time": 114, "config": "linux-devel-x86_64", "r": "4.6.0", "check": "ERROR", "artifact": "6238469818" }, { "job": 69671922886, "time": 148, "config": "linux-release-x86_64", "r": "4.5.3", "check": "ERROR", "artifact": "6238478559" }, { "job": 69671922894, "time": 126, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "ERROR", "artifact": "6238473283" }, { "job": 69671922915, "time": 115, "config": "macos-release-arm64", "r": "4.6.0", "check": "ERROR", "artifact": "6238470235" }, { "job": 69671489177, "time": 205, "config": "source", "r": "4.5.3", "check": "OK", "artifact": "6238440254" }, { "job": 69671922902, "time": 126, "config": "wasm-release", "r": "4.5.1", "check": "OK", "artifact": "6238473215" }, { "job": 69671922963, "time": 83, "config": "windows-devel", "r": "4.7.0", "check": "ERROR", "artifact": "6238462506" }, { "job": 69671923032, "time": 77, "config": "windows-oldrel", "r": "4.5.3", "check": "ERROR", "artifact": "6238460859" }, { "job": 69671923004, "time": 60, "config": "windows-release", "r": "4.6.0", "check": "ERROR", "artifact": "6238456526" } ], "_buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/Artur-man/ZarrDataFrame", "_commit": { "id": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "author": "Artur-man ", "committer": "Artur-man ", "message": "import realize from DelayedArray\n", "time": 1744666077 }, "_maintainer": { "name": "Artur Manukyan", "email": "artur-man@hotmail.com", "login": "artur-man", "uuid": 39335576 }, "_registered": true, "_dependencies": [ { "package": "DelayedArray", "role": "Depends" }, { "package": "S4Vectors", "role": "Depends" }, { "package": "stats", "role": "Imports" }, { "package": "utils", "role": "Imports" }, { "package": "methods", "role": "Imports" }, { "package": "BiocGenerics", "role": "Imports" }, { "package": "Rarr", "role": "Imports" }, { "package": "testthat", "version": ">= 3.0.0", "role": "Suggests" } ], "_owner": "artur-man", "_selfowned": true, "_usedby": 2, "_updates": [ { "week": "2025-16", "n": 1 } ], "_tags": [], "_topics": [ "datarepresentation", "infrastructure", "software" ], "_stars": 0, "_contributors": [ { "user": "artur-man", "count": 10, "uuid": 39335576 } ], "_userbio": { "uuid": 39335576, "type": "user", "name": "Artür Manukyan ", "description": "Bioinformatics Scientist at MDC BIMSB\r\n" }, "_downloads": { "count": 0, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/ZarrDataFrame" }, "_devurl": "https://github.com/artur-man/zarrdataframe", "_searchresults": 1, "_rbuild": "4.5.3", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/readme.html", "extra/readme.md", "extra/ZarrDataFrame.html", "manual.pdf" ], "_cranurl": false, "_exports": [ "DelayedArray", "extract_array", "extractCOLS", "extractROWS", "normalizeSingleBracketReplacementValue", "open_zarr", "path", "replaceCOLS", "replaceROWS", "type", "ZarrColumnSeed", "ZarrColumnVector", "zarrcreateGroup", "ZarrDataFrame" ], "_help": [ { "page": "open_zarr", "title": "open_zarr", "topics": [ "open_zarr" ] }, { "page": "ZarrColumnSeed", "title": "Column of an Zarr-based data frame", "topics": [ "DelayedArray,ZarrColumnSeed-method", "dim,ZarrColumnSeed-method", "extract_array,ZarrColumnSeed-method", "path,ZarrColumnSeed-method", "type,ZarrColumnSeed-method", "ZarrColumnSeed", "ZarrColumnSeed-class", "ZarrColumnVector", "ZarrColumnVector-class" ] }, { "page": "zarrcreateGroup", "title": "zarrcreateGroup", "topics": [ "zarrcreateGroup" ] }, { "page": "ZarrDataFrame", "title": "Zarr-backed DataFrame", "topics": [ "as.data.frame,ZarrDataFrame-method", "cbind,ZarrDataFrame-method", "cbind.ZarrDataFrame", "coerce,ZarrDataFrame,DFrame-method", "extractCOLS,ZarrDataFrame-method", "extractROWS,ZarrDataFrame,ANY-method", "length,ZarrDataFrame-method", "names,ZarrDataFrame-method", "names<-,ZarrDataFrame-method", "ncol,ZarrDataFrame-method", "normalizeSingleBracketReplacementValue,ZarrDataFrame-method", "nrow,ZarrDataFrame-method", "path,ZarrDataFrame-method", "replaceCOLS,ZarrDataFrame-method", "replaceROWS,ZarrDataFrame-method", "rownames,ZarrDataFrame-method", "rownames<-,ZarrDataFrame-method", "ZarrDataFrame", "ZarrDataFrame-class", "[[,ZarrDataFrame-method", "[[<-,ZarrDataFrame-method" ] } ], "_readme": "https://github.com/Artur-man/ZarrDataFrame/raw/HEAD/README.md", "_rundeps": [ "abind", "askpass", "base64enc", "BiocGenerics", "cli", "curl", "DelayedArray", "digest", "generics", "glue", "httr2", "IRanges", "jsonlite", "lattice", "lifecycle", "magrittr", "Matrix", "MatrixGenerics", "matrixStats", "openssl", "paws.common", "paws.storage", "R.methodsS3", "R.oo", "R.utils", "R6", "rappdirs", "Rarr", "Rcpp", "rlang", "S4Arrays", "S4Vectors", "SparseArray", "sys", "vctrs", "withr", "xml2", "XVector" ], "_score": 2.4771212547196626, "_indexed": true, "_nocasepkg": "zarrdataframe", "_universes": [ "artur-man" ], "_failure": { "version": "0.0.0", "commit": { "id": "6a44a53721f7e5f1fcc4e7ec3a147c4c4142a199", "author": "Artur-man ", "committer": "Artur-man ", "message": "migrate from Rarr to ZarrArray for ZarrArray\n", "time": 1777215883 }, "buildurl": "https://github.com/r-universe/artur-man/actions/runs/26847519991", "date": "2026-06-05T06:02:09.025Z", "job": { "job": 79672722558, "time": 149, "config": "source", "r": "4.6.0", "check": "ERROR", "artifact": "7429874969" } }, "_binaries": [ { "r": "4.6.0", "os": "linux", "version": "0.0.0", "date": "2026-04-02T09:19:23.000Z", "distro": "noble", "commit": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "fileid": "e6af3740924aa9971389a26b3d816f5d23ea0d83a56cd15e3dbffd85b6962261", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689" }, { "r": "4.5.3", "os": "mac", "version": "0.0.0", "date": "2026-04-02T09:19:38.000Z", "commit": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "fileid": "fc0194c80990c31adbda2ac6abbfb2c2fbebf0c3e7501819569f63d19a0f60b0", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689" }, { "r": "4.6.0", "os": "mac", "version": "0.0.0", "date": "2026-04-02T09:19:26.000Z", "commit": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "fileid": "ac6bd17d9bfe820647d535710fecd5a9467887cc1e6711eabb5fc66a95aefce5", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689" }, { "r": "4.5.1", "os": "wasm", "version": "0.0.0", "date": "2026-04-02T09:19:46.000Z", "commit": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "fileid": "dcb248b4185a48131a33d9e43583ef6a4fc9194bea6052954d2eb00020b2fbc7", "status": "success", "buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689" }, { "r": "4.7.0", "os": "win", "version": "0.0.0", "date": "2026-04-02T09:18:52.000Z", "commit": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "fileid": "f89adcf801b13fa53a803a3f1e373dd31d8a00efa41eff16ff80dbf6e299c63a", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689" }, { "r": "4.5.3", "os": "win", "version": "0.0.0", "date": "2026-04-02T09:18:45.000Z", "commit": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "fileid": "9d7cdbccb6abd18f7906c261c2aee4dddd588d1c25da2d425ac80428a0a3772b", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689" }, { "r": "4.6.0", "os": "win", "version": "0.0.0", "date": "2026-04-02T09:18:30.000Z", "commit": "e29a3981a0040ce8131b7df655c41323a6a7c9e6", "fileid": "18b187dbb5de38fe97abe1b91918c5a6041685b361ae9e93a8a727f2e606cbcc", "status": "failure", "check": "ERROR", "buildurl": "https://github.com/r-universe/artur-man/actions/runs/23893217689" } ] }